Welcome to the ITSxpress documentation page!

Contents:

• ITSxpress: Software to rapidly trim the internal transcribed spacer (ITS) region of FASTQ files
  • Authors
  • Citations
  • Introduction
  • Installing ITSxpress for use as a QIIME2 plugin
  • Installing ITSxpress for standalone use
  • Running ITSxpress as a Docker container
  • Dependencies
  • Usage
  • QIIME2 plugin Examples
  • Stand Alone Command Line Examples
  • ITS HMM Models
  • API Documentation
  • License information
• itsxpress
  • itsxpress package

Indices and tables

• Index

• Module Index

• Search Page