ITSxpress

Contents:

  • ITSxpress: Software to rapidly trim the internal transcribed spacer (ITS) region of FASTQ files
  • itsxpress
    • itsxpress package
ITSxpress
  • itsxpress
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itsxpress

  • itsxpress package
    • Submodules
      • itsxpress.SeqSample module
        • Dedup
        • ItsPosition
        • SeqSample
        • SeqSampleNotPaired
        • SeqSamplePairedNotInterleaved
      • itsxpress.definitions module
      • itsxpress.main module
        • _check_fastqs()
        • _check_total_reads()
        • _is_paired()
        • _logger_setup()
        • create_runtime_hmm()
        • create_temp_directory()
        • main()
        • myparser()
        • read_file()
        • restricted_float()
      • itsxpress.plugin_setup module
      • itsxpress.q2_itsxpress module
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